LongevityMap Gene
Gene details
- HGNC symbol
- TP53
- Aliases
- P53; BCC7; LFS1; TRP53
- Common name
- tumor protein p53
- Description
- This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016]
- Cytogenetic Location
- 17p13.1
- UCSC Genome Browser
- View 17p13.1 on the UCSC genome browser
- OMIM
- 191170
- Ensembl
- ENSG00000141510
- UniProt/Swiss-Prot
- A0A087WT22_HUMAN
- Entrez Gene
- 7157
- UniGene
- 437460
- 1000 Genomes
- 1000 Genomes
Homologs in model organisms
- Danio rerio
- tp53
- Mus musculus
- Trp53
- Rattus norvegicus
- LOC100910954
In other databases
- GenAge model organism genes
- A homolog of this gene for Mus musculus is present as Trp53
- GenAge human genes
- This gene is present as TP53
- CellAge
- This gene is present as TP53
Studies (37)
Significant/Non-significant: 22/15
Study 1
- Longevity Association
- Significant
- Population
- American (Caucasian)
- Study Design
- A genome-wide linkage scan on human longevity was performed in 279 families with multiple long-lived siblings
- Conclusions
- One locus on chromosome 3p24-22 had genome-wide significance
- Reference
Study 2
- Longevity Association
- Non-significant
- Population
- American (Caucasian)
- Study Design
- A genome-wide linkage scan on human longevity was performed in 279 families with multiple long-lived siblings
- Conclusions
- One locus on chromosome 9q31-34 was borderline significant and a peak on 12q24 was detected in a subset of the data. There was also modest evidence for a peak on 4q22-25.
- Reference
Study 3
- Longevity Association
- Significant
- Population
- European
- Study Design
- Genome-wide linkage scan in 2118 European nonagenarian sibships and younger controls from various European studies followed by genome-wide association study in a subgroup of 1228 unrelated nonagenarian and 1907 geographically matched controls
- Conclusions
- Four regions showed linkage to longevity (14q11.2, 17q12-q22, 19p13.3-p13.11 and 19q13.11-q13.32)
- Reference
Study 4
- Longevity Association
- Significant
- Population
- European
- Study Design
- Genome-wide linkage scan in 2118 European nonagenarian sibships and younger controls from various European studies followed by genome-wide association study in a subgroup of 1228 unrelated nonagenarian and 1907 geographically matched controls
- Conclusions
- Four regions showed linkage to longevity (14q11.2, 17q12-q22, 19p13.3-p13.11 and 19q13.11-q13.32)
- Reference
Study 5
- Longevity Association
- Significant
- Population
- European
- Study Design
- Genome-wide linkage scan in 2118 European nonagenarian sibships and younger controls from various European studies followed by genome-wide association study in a subgroup of 1228 unrelated nonagenarian and 1907 geographically matched controls
- Conclusions
- Four regions showed linkage to longevity (14q11.2, 17q12-q22, 19p13.3-p13.11 and 19q13.11-q13.32)
- Reference
Study 6
- Longevity Association
- Significant
- Population
- European
- Study Design
- Genome-wide linkage scan in 2118 European nonagenarian sibships and younger controls from various European studies followed by genome-wide association study in a subgroup of 1228 unrelated nonagenarian and 1907 geographically matched controls
- Conclusions
- Four regions showed linkage to longevity (14q11.2, 17q12-q22, 19p13.3-p13.11 and 19q13.11-q13.32)
- Reference
Study 7
- Longevity Association
- Significant
- Population
- American (Caucasian)
- Study Design
- Genome-wide scan for linkage in 308 individuals belonging to 137 sibships demonstrating exceptional longevity, predominantly of European descent
- Conclusions
- Significant evidence for linkage was noted for chromosome 4 at D4S1564
- Indentifier
- D4S1564
- Reference
Study 8
- Longevity Association
- Significant
- Population
- Italian (Central)
- Study Design
- A cross-sectional population study of 1072 individuals (18–106 years old) was performed and TP53 variants were analyzed
- Conclusions
- The variant rs1042522 affects females longevity, showing significant associations with longevity in the comparison of individuals >91 years old with individuals aged 73-91 years old. The TP53 P72 allele is significantly underrepresented in the >91 years old women group.
- Indentifier
- rs1042522
- Reference
Study 9
- Longevity Association
- Non-significant
- Population
- Chinese
- Study Design
- Twenty-eight mtDNA haplogroups were studied in 463 individuals with exceptional longevity (>95 years). As controls, 926 individuals aged 60-69 years (elderly group) and 463 individuals aged 40-49 years (middle-aged group) were used.
- Conclusions
- M9 haplogroups in longevity subjects were reduced and a decreasing trend of N9 frequency was also observed. An increasing trend of D4 frequency and a decreasing trend of B4a frequency were observed in females. None of the associations were significant, however, after controlling for multiple testing.
- Reference
Study 10
- Longevity Association
- Significant
- Population
- American (Caucasian)
- Study Design
- Genome-wide association study using 1,471 genotyped participants from the Framingham Heart Study, of which 1,173 individuals had known lifespans, plus 517 individuals from the Offspring cohort for validating connections between longevity and genetic variants
- Conclusions
- A total of 27 SNPs were identified at the intersection of various statistical procedures
- Indentifier
- rs9616906
- Reference
Study 11
- Longevity Association
- Significant
- Population
- American (Caucasian)
- Study Design
- Genome-wide association study using 1,471 genotyped participants from the Framingham Heart Study, of which 1,173 individuals had known lifespans, plus 517 individuals from the Offspring cohort for validating connections between longevity and genetic variants
- Conclusions
- A total of 27 SNPs were identified at the intersection of various statistical procedures
- Indentifier
- rs13008689
- Reference
Study 12
- Longevity Association
- Significant
- Population
- American (Caucasian)
- Study Design
- Genome-wide association study using 1,471 genotyped participants from the Framingham Heart Study, of which 1,173 individuals had known lifespans, plus 517 individuals from the Offspring cohort for validating connections between longevity and genetic variants
- Conclusions
- A total of 27 SNPs were identified at the intersection of various statistical procedures
- Indentifier
- rs10819510
- Reference
Study 13
- Longevity Association
- Significant
- Population
- American (Caucasian)
- Study Design
- Genome-wide association study using 1,471 genotyped participants from the Framingham Heart Study, of which 1,173 individuals had known lifespans, plus 517 individuals from the Offspring cohort for validating connections between longevity and genetic variants
- Conclusions
- A total of 27 SNPs were identified at the intersection of various statistical procedures.
- Indentifier
- rs3120819
- Reference
Study 14
- Longevity Association
- Significant
- Population
- American (Caucasian)
- Study Design
- Genome-wide association study using 1,471 genotyped participants from the Framingham Heart Study, of which 1,173 individuals had known lifespans, plus 517 individuals from the Offspring cohort for validating connections between longevity and genetic variants
- Conclusions
- A total of 27 SNPs were identified at the intersection of various statistical procedures
- Indentifier
- rs1205035
- Reference
Study 15
- Longevity Association
- Non-significant
- Population
- Chinese (Guangxi Bama)
- Study Design
- The mtDNA of ten bama centenarians were sequenced and seven novel variations were identified. 313 individuals(113 samples in the 90-110 y, 75 between 80-89 y and 125 between 10-79 y) were involved for the analysis of 26 variations in mtDNA D-loop and several serum parameters.
- Conclusions
- The frequency of mt146A had no significant difference among the three age groups(90-110 y, 80-89 y and 10-79 y) (P > 0.005), neither with the mt5178A/C polymorphism (P > 0.05)
- Indentifier
- mt146A
- Reference
Study 16
- Longevity Association
- Non-significant
- Population
- English (Newcastle)
- Study Design
- The mtDNA haplogroups were studied in 700 more than 85-year-old subjects to identify the association with frailty and mortality
- Conclusions
- No association between mtDNA haplogroups and either frailty or survival beyond age 85 or any informative biomarker of aging
- Reference
Study 17
- Longevity Association
- Non-significant
- Population
- American (Utah)
- Study Design
- A whole-genome scan for genetic linkage was performed in 325 individuals who exhibited high levels of both familial longevity and individual longevity
- Conclusions
- There were no significant results after correcting for multiple testing. The strongest signal was observed in marker D3S3547, in 3p24.1, and other suggestive peaks were observed in 18q23-24, 8q23, and 17q21.
- Indentifier
- D3S3547
- Reference
Study 18
- Longevity Association
- Non-significant
- Population
- American (Utah)
- Study Design
- A whole-genome scan for genetic linkage was performed in 325 individuals who exhibited high levels of both familial longevity and individual longevity
- Conclusions
- There were no significant results after correcting for multiple testing. The strongest signal was observed in marker D3S3547, in 3p24.1, and other suggestive peaks were observed in 18q23-24, 8q23, and 17q21.
- Reference
Study 19
- Longevity Association
- Non-significant
- Population
- American (Utah)
- Study Design
- A whole-genome scan for genetic linkage was performed in 325 individuals who exhibited high levels of both familial longevity and individual longevity
- Conclusions
- There were no significant results after correcting for multiple testing. The strongest signal was observed in marker D3S3547, in 3p24.1, and other suggestive peaks were observed in 18q23-24, 8q23, and 17q21.
- Reference
Study 20
- Longevity Association
- Non-significant
- Population
- American (Utah)
- Study Design
- A whole-genome scan for genetic linkage was performed in 325 individuals who exhibited high levels of both familial longevity and individual longevity
- Conclusions
- There were no significant results after correcting for multiple testing. The strongest signal was observed in marker D3S3547, in 3p24.1, and other suggestive peaks were observed in 18q23-24, 8q23, and 17q21.
- Reference
Study 21
- Longevity Association
- Non-significant
- Population
- Chinese (Han)
- Study Design
- 556 longevous individuals (354 females, 90-108 years, mean ± SD: 94.59 ± 3.34 years) and 403 unrelated controls (199 females, 22-73 years, mean ± SD: 56.24 ± 7.81 years) were examined for the association between mtDNA C150T and longevity
- Conclusions
- There was no significant association between C150T and longevity even when mtDNA haplogroups defined by C150T and gender were taken into account
- Indentifier
- MtC150T
- Reference
Study 22
- Longevity Association
- Significant
- Population
- Japanese
- Study Design
- The correlation between mitochondrial polymorphisms and the longevity phenotype was analyzed in 112 Japanese semi-supercentenarians and 672 previous published sequences from individuals with non-disease phenotypes
- Conclusions
- mtSNP 14979C (Cytb: Ile78Thr) in D4a was identified to be correlated with extreme longevity
- Indentifier
- 14979C
- Reference
Study 23
- Longevity Association
- Significant
- Population
- Finnish
- Study Design
- The frequencies of mtDNA haplogroups and haplogroup clusters were examined among elderly subjects and controls in a Finnish population: 225 persons aged 90 or 91 years (Vitality 90+, 179 women, 400 mid-age controls (18–65 years; mean age: 40.5 years)) and 257 infants (2–12 months; mean: 6.5 months))
- Conclusions
- Haplogroup H was less frequent among the Vitality 90+ cases than among the middle-aged subjects (P=0.001) and infants (P=0.00001), whereas haplogroups J, U and K were more frequent. Haplogroup clusters also differed between Vitality 90+ and both the middle-aged subjects (P=0.002) and infants (P=0.00001), the frequency of haplogroup cluster HV being lower in the former and that of UK and WIX being higher. MtDNA haplogroups or haplogroup clusters were associated with longevity.
- Reference
Study 24
- Longevity Association
- Significant
- Population
- Italian
- Study Design
- Inherited mtDNA markers were analyzed between a sample of individuals selected for successful aging and longevity (212 subjects older than 100 years and in good clinical condition) and a sample of 275 younger individuals (20–75 years, median age 38 years) carefully matched as to sex and geographic origin
- Conclusions
- Male centenarians emerged in northern Italy as a particular sample: 1) mtDNA haplogroup frequency distribution was different between centenarians and younger individuals (P=0.017 by permutation tests); and 2) the frequency of the J haplogroup was notably higher in centenarians than in younger individuals (P=0.0052 by Fisher exact test). MtDNA inherited variability could play a role in successful aging and longevity.
- Reference
Study 25
- Longevity Association
- Significant
- Population
- Italian (Northern)
- Study Design
- The rs1333049 polymorphism was examined in a sample of 80 healthy centenarians (100-104y, 41 females), 218 patients younger than 40 who had experienced an acute myocardial infarction (22-39y, 53 females), and a control group of 258 healthy young volunteers (22–39y, 120 females) matched to acute myocardial infarction patients for age and sex
- Conclusions
- The frequency of the C allele of rs1333049 was significantly lower in centenarians compared to young controls, whereas acute myocardial infarction patients showed a higher frequency. After adjustment for gender and vascular risk factors, the C allele of rs1333049 remained significantly associated with a reduced likelihood to reach longevity: Odds ratio 0.64, 95% confidence interval (CI) 0.39-0.89, p < 0.01. The rs1333049 polymorphism may influence successful longevity, possibly by modulating the risk of age-related disorders.
- Indentifier
- rs1333049
- Reference
Study 26
- Longevity Association
- Significant
- Population
- Danish
- Study Design
- Participants (n = 9,219) of the Copenhagen City Heart Study were genotyped for the p53 Arg72Pro polymorphism. Then the morbidity of 6 subtypes of cancer and mortality were assessed for each genotype.
- Conclusions
- The risk of hematologic cancer increased 2-fold in Arg/Pro heterozygotes vs. Arg/Arg homozygotes (p < 0.001), with a similar trend in Pro/Pro homozygotes. The overall 12-year survival after blood sampling was increased in Arg/Pro heterozygotes with 3% (p = 0.003) and in Pro/Pro homozygotes with 6% (p = 0.002) vs. Arg/Arg homozygotes. The cumulative 5-year mortality after a cancer diagnosis was reduced in Arg/Pro heterozygotes and Pro/Pro homozygotes vs. Arg/Arg homozygotes by 9% (p = 0.003) and 13% (p = 0.03). These results suggest a better prognosis in Arg/Pro heterozygotes and Pro/Pro homozygotes vs. Arg/Arg homozygotes after the diagnosis of cancer or other life-threatening disease.
- Indentifier
- rs1042522
- Reference
Study 27
- Longevity Association
- Significant
- Population
- European (Danish, Finnish, South Italian and Greek)
- Study Design
- mtDNA sequences were analyzed in 4239 European individuals. 1292 individuals (646 ultranonagenarians and 646 controls) were selected for complete sequencing. The mtDNA subhaplogroups were determined in remaining 2947 samples (1449 ultranonagenarians and 1498 controls) to verify possible haplogroup association with longevity and the distribution pattern among European counties.
- Conclusions
- The distribution of H2, T2 haplogroup in female and H1, J2 in male showed differences between older subjects and younger controls, but no association was detectable when corrected for multiple test. Mitochondrial DNA variation does affect human longevity, but its effect is heavily influenced by the interaction between mutations concomitantly occurring on different mtDNA genes.
- Reference
Study 28
- Longevity Association
- Significant
- Population
- Spanish
- Study Design
- Allele and genotype distributions of rs1333049 were compared in centenarians and younger adults (without (healthy) or with CAD) in two independent cohorts: Spanish and Japanese.
- Conclusions
- The frequency of the GG genotype in centenarians was higher than either healthy or CAD controls in Spanish. In the Japanese cohort, C allele did not differ between centenarians and healthy controls, but it was significantly lower in centenarians than in CAD controls.
- Indentifier
- rs1333049
- Reference
Study 29
- Longevity Association
- Significant
- Population
- Japanese
- Study Design
- Allele and genotype distributions of rs1333049 were compared in centenarians and younger adults (without (healthy) or with CAD) in two independent cohorts: Spanish and Japanese.
- Conclusions
- The frequency of the GG genotype in centenarians was higher than either healthy or CAD controls in Spanish. In the Japanese cohort, C allele did not differ between centenarians and healthy controls, but it was significantly lower in centenarians than in CAD controls.
- Indentifier
- rs1333049
- Reference
Study 30
- Longevity Association
- Significant
- Population
- Italian (Northern)
- Study Design
- GSTT1 (Glutathione S-transferase theta 1) deletion and the simultaneous presence of the three p53 polymorphisms were examined in 66 nonagenarians and centenarians in good health and in a sample of 150 young healthy volunteers of the same ethnic group
- Conclusions
- No significant differences were found for individual genes. However, the absence of any p53 polymorphisms and of GSTT1 deletion, and the simultaneous presence of the three p53 polymorphisms and of GSTT1 deletion, were much more frequent in young subjects than in centenarians (41.5% versus 26.9% and 8.8% versus 3.8%, respectively).
- Indentifier
- TP53
- Reference
Study 31
- Longevity Association
- Non-significant
- Population
- German
- Study Design
- Genome-wide association study comparing 664,472 autosomal SNPs in 763 long-lived individuals (mean age: 99.7 years) and 1085 controls (mean age: 60.2 years). Top SNPs from the GWAS were further investigated in an independent German sample comprised of 754 long-lived individuals (mean age: 96.9 years) and 860 controls (mean age: 67.3 years).
- Conclusions
- Fifteen SNPs had indicative association with longevity, even if not statistically significant after correcting for multiple hypothesis testing. None of these SNPs were validated in the follow-up analysis. Since rs12741354 (in ASTN1) was nearly significant, it was further investigated in French centenarians but it failed to be associated with longevity.
- Reference
Study 32
- Longevity Association
- Non-significant
- Population
- Italian (Southern)
- Study Design
- A two-stage case-control study was performed to identify the association between longevity and variation of in homeostasis regulation pathway genes. 317 SNPs in 104 genes were analyzed in 78 cases (≥90 years, median age 98 years, 42 females) and 71 controls (<90 years, median age 67 years, 32 females) in stage 1. Then, 31 candidate SNPs identified in stage 1 (π markers = 0.1) were analyzed in an independent sample composed by 288 cases (≥90 years, median age 92 years, 163 females) and 554 controls (<90 years, median age 67 years, 277 females).
- Conclusions
- After adjustment for multiple testing, no significant association was identified between various SNPs and longevity.
- Reference
Study 33
- Longevity Association
- Significant
- Population
- Irish
- Study Design
- Polymorphic restriction enzyme sites within a 2643 bp region of mtDNA were identified by PCR-RFLP in 129 aged individuals (80- 97y, 70% female) and 100 controls (19- 45y, 59% female). Then, genetic haplotypes for a healthy aged and a younger control cohort of patients was constructed to find out the relationship between longevity and mtDNA polymorphisms.
- Conclusions
- The were no significant frequency differences between the two age groups for 46 identified haplotypes. However, the branch of haplotypes defined by 16389g displayed a significant increased frequency in the aged samples (P=0.015). Inversely, the branch of haplotypes defined by 16000g displayed a significant decreased frequency in the aged samples (P=0.011).
- Indentifier
- 16389g
- Reference
Study 34
- Longevity Association
- Non-significant
- Population
- Irish
- Study Design
- Polymorphic restriction enzyme sites within a 2643 bp region of mtDNA were identified by PCR-RFLP in 129 aged individuals (80- 97y, 70% female) and 100 controls (19- 45y, 59% female). Then, genetic haplotypes for a healthy aged and a younger control cohort of patients was constructed to find out the relationship between longevity and mtDNA polymorphisms.
- Conclusions
- The were no significant frequency differences between the two age groups for 46 identified haplotypes. The previously reported longevity associated European J haplogroup was not found at an increased frequency within the Irish aged population (P=0.36). The polymorphism (mt5178A) associated with longevity in the Japanese was not found in the Irish population, while the polymorphism (mt9055A) associated with successful ageing in French centenarians was found at a noticeable but not significant (P=0.164) increased frequency in the Irish aged population compared to the younger control group.
- Indentifier
- mt9055A
- Reference
Study 35
- Longevity Association
- Non-significant
- Population
- Danish
- Study Design
- 592 SNPs from 77 genes involved in nine sub-processes were analyzed in 1089 long-lived and 736 middle-aged Danes. Then, a replicated study was carried out in a German cohort.
- Conclusions
- The results did not remain significant after correction. The findings drawn from the Danish cohort were not replicated in German samples.
- Indentifier
- rs9894946
- Reference
Study 36
- Longevity Association
- Non-significant
- Population
- American (Caucasian)
- Study Design
- A genome-wide linkage scan on human longevity was performed in 279 families with multiple long-lived siblings
- Conclusions
- One locus on chromosome 9q31-34 was borderline significant and a peak on 12q24 was detected in a subset of the data. There was also modest evidence for a peak on 4q22-25.
- Reference
Study 37
- Longevity Association
- Non-significant
- Population
- American (Caucasian)
- Study Design
- A genome-wide linkage scan on human longevity was performed in 279 families with multiple long-lived siblings
- Conclusions
- One locus on chromosome 9q31-34 was borderline significant and a peak on 12q24 was detected in a subset of the data. There was also modest evidence for a peak on 4q22-25.
- Reference