LongevityMap variant

Entry Details

Longevity Association
Significant
Population
American (Caucasian)
Study Design
Genome-wide association study using 1,471 genotyped participants from the Framingham Heart Study, of which 1,173 individuals had known lifespans, plus 517 individuals from the Offspring cohort for validating connections between longevity and genetic variants
Conclusions
A total of 27 SNPs, including in CDH4, SVEP1, CACNA1C, CARS, STK24, C7orf50, PARVG, NCAM2, PPP2R2C, NLRC5, BTBD9, RAC2, TGFA, KIAA0649, ABCC4, CLSTN2, FAM19A5 and RUNX3, were identified at the intersection of various statistical procedures
Identifier
rs2370413
Cytogenetic Location
12p13.33
UCSC Genome Browser
View 12p13.33 on the UCSC genome browser

Gene details

HGNC symbol
CACNA1C
Aliases
TS; LQT8; CACH2; CACN2; CaV1.2; CCHL1A1; CACNL1A1 
Common name
calcium voltage-gated channel subunit alpha1 C 
Description
This gene encodes an alpha-1 subunit of a voltage-dependent calcium channel. Calcium channels mediate the influx of calcium ions into the cell upon membrane polarization. The alpha-1 subunit consists of 24 transmembrane segments and forms the pore through which ions pass into the cell. The calcium channel consists of a complex of alpha-1, alpha-2/delta, beta, and gamma subunits in a 1:1:1:1 ratio. There are multiple isoforms of each of these proteins, either encoded by different genes or the result of alternative splicing of transcripts. The protein encoded by this gene binds to and is inhibited by dihydropyridine. Alternative splicing results in many transcript variants encoding different proteins. Some of the predicted proteins may not produce functional ion channel subunits. [provided by RefSeq, Oct 2012]
OMIM
114205
Ensembl
ENSG00000151067
UniProt/Swiss-Prot
A0A0A0MR67_HUMAN
Entrez Gene
775
UniGene
118262
HapMap
View on HapMap

Homologs in model organisms

Caenorhabditis elegans
egl-19
Danio rerio
cacna1c
Drosophila melanogaster
Ca-alpha1D
Mus musculus
Cacna1c
Rattus norvegicus
Cacna1c
Saccharomyces cerevisiae
CCH1

References

Yashin et al. (2012)

Other variants which are also part of this study